Transcript: ENST00000400454.1 DSCAM-001

Description

Down syndrome cell adhesion molecule [Source:HGNC Symbol;Acc:3039]

Gene Synonyms

CHD2-42, CHD2-52

Location

About this transcript

This transcript has 33 exons, is annotated with 96 domains and features, is associated with 393305 variant alleles and maps to 1055 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000400454.1	DSCAM-001	8552	2012aa	ENSP00000383303.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42929	O60469	NM_001389.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000404019.2	DSCAM-002	5374	1746aa	ENSP00000385342.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8WY19	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 33, Coding exons: 33, Transcript length: 8,552 bps, Translation length: 2,012 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O60469

CCDS

This transcript is a member of the Human CCDS set: CCDS42929

Version

ENST00000400454.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000195029 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.