Transcript: ENST00000376108.3 CLCN5-004

Description

chloride channel, voltage-sensitive 5 [Source:HGNC Symbol;Acc:2023]

Gene Synonyms

CLC5, CLCK2, ClC-5, DENTS, NPHL1, NPHL2, XLRH, XRN, hCIC-K2, hClC-K2

Location

Chromosome X: 49,832,231-49,857,063 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 43 domains and features, is associated with 7572 variant alleles and maps to 390 oligo probes.

Gene

This transcript is a product of gene ENSG00000171365.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000376088.3	CLCN5-001	10108	816aa	ENSP00000365256.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48115	P51795	NM_001127899.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000307367.2	CLCN5-003	3177	746aa	ENSP00000304257.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14328	P51795	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376091.3	CLCN5-002	3046	816aa	ENSP00000365259.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48115	P51795	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376108.3	CLCN5-004	2660	746aa	ENSP00000365276.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14328	P51795	NM_000084.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000482218.2	CLCN5-005	449	64aa	ENSP00000476732.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS69763	-	NM_001272102.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 2,660 bps, Translation length: 746 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P51795

CCDS

This transcript is a member of the Human CCDS set: CCDS14328

Version

ENST00000376108.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000056545 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000376108.3 CLCN5-004

Summary