Transcript: ENST00000549016.1 CHST11-005

Description

carbohydrate (chondroitin 4) sulfotransferase 11 [Source:HGNC Symbol;Acc:17422]

Gene Synonyms

C4ST, C4ST-1, C4ST1, C4St-1, HSA269537

Location

Chromosome 12: 104,982,626-105,151,117 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 3 domains and features, is associated with 67885 variant alleles and maps to 169 oligo probes.

Gene

This transcript is a product of gene ENSG00000171310.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000303694.5	CHST11-001	5709	352aa	ENSP00000305725.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9099	F8VXK3 Q9NPF2	NM_018413.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000549260.1	CHST11-002	5696	347aa	ENSP00000450004.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55878	F8VXK3 Q9NPF2	NM_001173982.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000547956.1	CHST11-007	936	77aa	ENSP00000449093.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VXK7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546689.1	CHST11-006	756	72aa	ENSP00000448678.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VRG6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000549016.1	CHST11-005	573	158aa	ENSP00000449095.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VXK3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000550711.1	CHST11-004	423	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 573 bps, Translation length: 158 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000549016.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000406057 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000549016.1 CHST11-005

Summary