Transcript: ENST00000303545.3 RNF139-001

Description

ring finger protein 139 [Source:HGNC Symbol;Acc:17023]

Gene Synonyms

HRCA1, RCA1, TRC8

Location

About this transcript

This transcript has 2 exons, is annotated with 23 domains and features, is associated with 6669 variant alleles and maps to 260 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000303545.3	RNF139-001	2637	664aa	ENSP00000304051.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6350	E5RH85 Q8WU17	NM_007218.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000517684.2	RNF139-002	467	68aa	ENSP00000429836.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RH85	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 2,637 bps, Translation length: 664 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8WU17

CCDS

This transcript is a member of the Human CCDS set: CCDS6350

Version

ENST00000303545.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000381692 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.