Transcript: ENST00000302334.2 BFSP2-001

Description

beaded filament structural protein 2, phakinin [Source:HGNC Symbol;Acc:1041]

Gene Synonyms

CP47, CP49, CTRCT12, LIFL-L, PHAKOSIN, phakinin

Location

About this transcript

This transcript has 7 exons, is annotated with 16 domains and features, is associated with 37004 variant alleles and maps to 446 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000302334.2	BFSP2-001	1558	415aa	ENSP00000304987.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33859	Q13515	NM_003571.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000511434.1	BFSP2-004	660	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000510039.1	BFSP2-006	643	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000513441.1	BFSP2-005	521	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000511140.1	BFSP2-002	374	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000503047.1	BFSP2-003	462	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,558 bps, Translation length: 415 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13515

CCDS

This transcript is a member of the Human CCDS set: CCDS33859

Version

ENST00000302334.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000357031 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.