Transcript: ENST00000355315.3 CHCHD7-002

Description

coiled-coil-helix-coiled-coil-helix domain containing 7 [Source:HGNC Symbol;Acc:28314]

Gene Synonyms

COX23, MGC2217

Location

Chromosome 8: 57,124,314-57,131,172 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 3231 variant alleles and maps to 334 oligo probes.

Gene

This transcript is a product of gene ENSG00000170791.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000523975.1	CHCHD7-001	1805	97aa	ENSP00000428917.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6166	E5RJ08 Q9BUK0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000303759.3	CHCHD7-201	1684	110aa	ENSP00000306425.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34895	E5RJ08 J3KPV1 Q9BUK0	NM_024300.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518801.1	CHCHD7-005	1670	68aa	ENSP00000428274.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55232	Q9BUK0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396723.5	CHCHD7-004	1550	94aa	ENSP00000379949.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJ08 J3KPV1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000355315.3	CHCHD7-002	1535	85aa	ENSP00000347469.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34896	E5RJ08 Q9BUK0	NM_001011671.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000521524.1	CHCHD7-012	703	68aa	ENSP00000430458.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55232	Q9BUK0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000517933.1	CHCHD7-009	580	60aa	ENSP00000430350.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFN2 E5RJ08	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000521831.1	CHCHD7-006	573	56aa	ENSP00000429635.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55233	Q9BUK0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000523061.1	CHCHD7-011	557	46aa	ENSP00000430882.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RHM5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000517636.1	CHCHD7-013	536	44aa	ENSP00000429230.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJ08	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000519367.1	CHCHD7-014	442	56aa	ENSP00000428095.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55233	Q9BUK0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000523532.1	CHCHD7-017	567	65aa	ENSP00000430498.1	Nonsense mediated decay		E5RJ15	-	-
ENST00000523667.1	CHCHD7-015	559	65aa	ENSP00000429217.1	Nonsense mediated decay		E5RJ15	-	-
ENST00000521982.1	CHCHD7-018	552	61aa	ENSP00000430714.1	Nonsense mediated decay		E5RII1 E5RJ08	-	-
ENST00000522166.1	CHCHD7-003	3157	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000522366.1	CHCHD7-008	1030	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000518944.1	CHCHD7-010	582	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000518169.1	CHCHD7-007	442	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,535 bps, Translation length: 85 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BUK0

CCDS

This transcript is a member of the Human CCDS set: CCDS34896

Version

ENST00000355315.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000378218 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000355315.3 CHCHD7-002

Summary