Transcript: ENST00000397040.1 RALGAPB-006

Description

Ral GTPase activating protein, beta subunit (non-catalytic) [Source:HGNC Symbol;Acc:29221]

Gene Synonyms

DKFZp781M2411, KIAA1219, RalGAPbeta

Location

Chromosome 20: 37,101,543-37,207,502 forward strand.

About this transcript

This transcript has 30 exons, is annotated with 10 domains and features, is associated with 43918 variant alleles and maps to 1089 oligo probes.

Gene

This transcript is a product of gene ENSG00000170471.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262879.6	RALGAPB-001	8661	1494aa	ENSP00000262879.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13305	Q6MZJ2 Q86X10	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397042.3	RALGAPB-005	8652	1491aa	ENSP00000380235.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS63272	A2A2E9 Q6MZJ2	NM_001282918.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397038.1	RALGAPB-201	8639	1273aa	ENSP00000380231.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6MZJ2 Q86X10	NM_020336.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397040.1	RALGAPB-006	8435	1494aa	ENSP00000380233.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13305	Q6MZJ2 Q86X10	NM_001282917.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000438490.1	RALGAPB-008	4075	1323aa	ENSP00000416646.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2A2F0 Q6MZJ2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000537204.1	RALGAPB-202	1727	477aa	ENSP00000442959.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E2E8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000490114.1	RALGAPB-002	928	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495949.1	RALGAPB-004	636	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461147.1	RALGAPB-009	5050	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000461423.1	RALGAPB-007	3830	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 30, Coding exons: 29, Transcript length: 8,435 bps, Translation length: 1,494 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q86X10

CCDS

This transcript is a member of the Human CCDS set: CCDS13305

Version

ENST00000397040.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000276803 (version 1)

Annotation Attributes

dotter confirmed [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000397040.1 RALGAPB-006

Summary