Transcript: ENST00000524050.1 PWWP2A-006

Description

PWWP domain containing 2A [Source:HGNC Symbol;Acc:29406]

Gene Synonyms

KIAA1935, MST101

Location

Chromosome 5: 159,488,808-159,520,187 reverse strand.

About this transcript

This transcript has 6 exons, is associated with 13137 variant alleles and maps to 162 oligo probes.

Gene

This transcript is a product of gene ENSG00000170234.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000307063.7	PWWP2A-002	3343	755aa	ENSP00000305151.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47332	Q96N64	NM_001130864.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456329.3	PWWP2A-001	3991	560aa	ENSP00000390462.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47331	Q96N64	NM_052927.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000523662.1	PWWP2A-004	1819	520aa	ENSP00000428143.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58990	G5EA07	NM_001267035.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524050.1	PWWP2A-006	767	35aa	ENSP00000428636.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000521424.1	PWWP2A-005	734	69aa	ENSP00000430696.1	Nonsense mediated decay		H0YC06	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000520662.1	PWWP2A-003	407	49aa	ENSP00000430703.1	Nonsense mediated decay		H0YC08	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 2, Transcript length: 767 bps, Translation length: 35 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000524050.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000374088 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000524050.1 PWWP2A-006

Summary