Transcript: ENST00000500450.2 CNBP-004

Description

CCHC-type zinc finger, nucleic acid binding protein [Source:HGNC Symbol;Acc:13164]

Gene Synonyms

CNBP1, DM2, PROMM, RNF163, ZCCHC22, ZNF9

Location

Chromosome 3: 128,888,412-128,902,753 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 32 domains and features, is associated with 8145 variant alleles and maps to 399 oligo probes.

Gene

This transcript is a product of gene ENSG00000169714.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000422453.2	CNBP-001	1664	177aa	ENSP00000410619.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3056	P62633 Q6T598	NM_003418.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000451728.2	CNBP-010	1641	178aa	ENSP00000399488.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46907	P62633 Q6T598	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000502976.1	CNBP-002	1626	170aa	ENSP00000421323.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54637	P62633 Q6T598	NM_001127196.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000446936.2	CNBP-011	1623	172aa	ENSP00000400444.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46908	P62633 Q4JGY1 Q6T598	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504813.1	CNBP-003	1549	167aa	ENSP00000422110.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P62633 Q6T598	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000500450.2	CNBP-004	1516	160aa	ENSP00000426223.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DP17 Q6T598	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441626.2	CNBP-009	1040	179aa	ENSP00000410769.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46906	P62633 Q6T598	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000512338.1	CNBP-008	502	113aa	ENSP00000424787.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RAT4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000502372.1	CNBP-006	1026	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000507573.1	CNBP-005	641	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,516 bps, Translation length: 160 residues

Version

ENST00000500450.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000358422 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000500450.2 CNBP-004

Summary