Transcript: ENST00000474331.1 CKAP2L-006

Description

cytoskeleton associated protein 2-like [Source:HGNC Symbol;Acc:26877]

Gene Synonyms

FLJ40629

Location

About this transcript

This transcript has 4 exons, is associated with 5578 variant alleles and maps to 138 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000541405.1	CKAP2L-201	4737	580aa	ENSP00000438763.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H0M5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000302450.6	CKAP2L-001	4533	745aa	ENSP00000305204.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2100	F5H0M5 Q8IYA6	NM_152515.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000435431.1	CKAP2L-002	2455	188aa	ENSP00000414834.1	Nonsense mediated decay		F8WBE0	-	-
ENST00000481732.1	CKAP2L-005	557	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497357.1	CKAP2L-004	551	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461876.1	CKAP2L-003	431	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474331.1	CKAP2L-006	801	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 801 bps,

Version

ENST00000474331.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000330657 (version 1)