Transcript: ENST00000368406.2 EFNA1-002

Description

ephrin-A1 [Source:HGNC Symbol;Acc:3221]

Gene Synonyms

B61, ECKLG, EFL1, EPLG1, LERK-1, LERK1, TNFAIP4

Location

About this transcript

This transcript has 4 exons, is annotated with 14 domains and features, is associated with 3408 variant alleles and maps to 375 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000368407.3	EFNA1-001	1926	205aa	ENSP00000357392.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1091	P20827	NM_004428.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368406.2	EFNA1-002	1444	183aa	ENSP00000357391.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1092	P20827	NM_182685.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000469878.1	EFNA1-003	1288	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474413.1	EFNA1-004	1083	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497282.1	EFNA1-005	719	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,444 bps, Translation length: 183 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P20827

CCDS

This transcript is a member of the Human CCDS set: CCDS1092

Version

ENST00000368406.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000085485 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.