Transcript: ENST00000561854.1 COG7-003

Description

component of oligomeric golgi complex 7 [Source:HGNC Symbol;Acc:18622]

Gene Synonyms

CDG2E

Location

About this transcript

This transcript has 4 exons, is annotated with 2 domains and features, is associated with 2080 variant alleles and maps to 174 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000307149.5	COG7-001	2926	770aa	ENSP00000305442.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10610	P83436	NM_153603.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000563164.1	COG7-005	741	113aa	ENSP00000460151.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000561854.1	COG7-003	814	88aa	ENSP00000459872.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000569635.1	COG7-007	474	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000566364.1	COG7-006	939	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000567821.1	COG7-004	922	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 814 bps, Translation length: 88 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000561854.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000434819 (version 2)