Transcript: ENST00000572337.1 RFWD3-012

Description

ring finger and WD repeat domain 3 [Source:HGNC Symbol;Acc:25539]

Gene Synonyms

FLJ10520, RNF201

Location

Chromosome 16: 74,678,518-74,700,757 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 12958 variant alleles and maps to 142 oligo probes.

Gene

This transcript is a product of gene ENSG00000168411.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000361070.4	RFWD3-001	4957	774aa	ENSP00000354361.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32486	I3L284 I3L299 I3L2T2 I3L4I5 Q6PCD5	NM_018124.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000571750.1	RFWD3-002	3033	774aa	ENSP00000460049.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32486	I3L284 I3L299 I3L2T2 I3L4I5 Q6PCD5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000575113.1	RFWD3-009	706	116aa	ENSP00000461285.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L4I5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000572990.1	RFWD3-010	599	150aa	ENSP00000459899.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L299 I3L2T2 I3L4I5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000572337.1	RFWD3-012	586	24aa	ENSP00000459465.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L284	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000576652.1	RFWD3-011	528	122aa	ENSP00000459515.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L299 I3L4I5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000571776.1	RFWD3-007	936	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000575397.1	RFWD3-008	841	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000572610.1	RFWD3-004	572	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000575154.1	RFWD3-005	547	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000575281.1	RFWD3-006	494	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000572840.1	RFWD3-003	458	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 1, Transcript length: 586 bps, Translation length: 24 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000572337.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000436544 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000572337.1 RFWD3-012

Summary