Transcript: ENST00000400770.2 DTYMK-002

Description

deoxythymidylate kinase (thymidylate kinase) [Source:HGNC Symbol;Acc:3061]

Gene Synonyms

CDC8, PP3731, TMPK, TYMK, tmp_locus_5

Location

About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 5647 variant alleles and maps to 518 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000305784.2	DTYMK-001	1232	212aa	ENSP00000304802.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2552	P23919 Q6FGU2	NM_012145.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000420144.1	DTYMK-008	575	192aa	ENSP00000387379.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000445261.1	DTYMK-006	518	170aa	ENSP00000408939.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000400770.2	DTYMK-002	1089	83aa	ENSP00000383581.2	Nonsense mediated decay		G5E9E9	-	-
ENST00000432348.1	DTYMK-004	926	101aa	ENSP00000410647.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000493095.1	DTYMK-005	322	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464603.1	DTYMK-003	890	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,089 bps, Translation length: 83 residues

Version

ENST00000400770.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000322959 (version 1)