Transcript: ENST00000485460.1 PDHB-005

Description

pyruvate dehydrogenase (lipoamide) beta [Source:HGNC Symbol;Acc:8808]

Gene Synonyms

PDHBD, PDHE1-B, PHE1B

Location

Chromosome 3: 58,413,399-58,419,545 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 10 domains and features, is associated with 3071 variant alleles and maps to 491 oligo probes.

Gene

This transcript is a product of gene ENSG00000168291.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000302746.6	PDHB-001	1527	359aa	ENSP00000307241.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2890	P11177	NM_001173468.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000474765.1	PDHB-007	1503	350aa	ENSP00000418448.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J634	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000383714.4	PDHB-008	1478	341aa	ENSP00000373220.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P11177	-	-
ENST00000485460.1	PDHB-005	1397	341aa	ENSP00000417267.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54602	P11177	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000469364.1	PDHB-006	1616	251aa	ENSP00000419580.1	Nonsense mediated decay		F8WF02	-	-
ENST00000479945.1	PDHB-003	4459	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000461692.1	PDHB-002	1535	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000480626.1	PDHB-011	710	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000469827.1	PDHB-009	586	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000482894.1	PDHB-010	581	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,397 bps, Translation length: 341 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P11177

CCDS

This transcript is a member of the Human CCDS set: CCDS54602

Version

ENST00000485460.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000353562 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000485460.1 PDHB-005

Summary