Transcript: ENST00000529887.2 PAFAH1B2-006

Description

platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa) [Source:HGNC Symbol;Acc:8575]

Gene Synonyms

HEL-S-303, PAFAHB

Location

Chromosome 11: 117,015,014-117,047,138 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 4 domains and features, is associated with 17645 variant alleles and maps to 244 oligo probes.

Gene

This transcript is a product of gene ENSG00000168092.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000527958.1	PAFAH1B2-001	4195	229aa	ENSP00000435289.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8380	P68402	NM_002572.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000419197.2	PAFAH1B2-201	2517	132aa	ENSP00000388742.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53713	P68402	NM_001184748.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529887.2	PAFAH1B2-006	1056	155aa	ENSP00000434951.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53715	P68402	NM_001184747.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000530272.1	PAFAH1B2-004	850	202aa	ENSP00000431365.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53714	P68402	NM_001184746.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000304808.6	PAFAH1B2-007	821	175aa	ENSP00000304006.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KNE3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000526888.1	PAFAH1B2-002	1099	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000533677.1	PAFAH1B2-010	756	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000533206.1	PAFAH1B2-008	685	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,056 bps, Translation length: 155 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P68402

CCDS

This transcript is a member of the Human CCDS set: CCDS53715

Version

ENST00000529887.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000392832 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000529887.2 PAFAH1B2-006

Summary