Transcript: ENST00000354895.4 VKORC1-003

Description

vitamin K epoxide reductase complex, subunit 1 [Source:HGNC Symbol;Acc:23663]

Gene Synonyms

EDTP308, IMAGE3455200, MST134, MST576, VKCFD2, VKOR

Location

Chromosome 16: 31,102,163-31,106,277 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 5 domains and features, is associated with 2221 variant alleles and maps to 242 oligo probes.

Gene

This transcript is a product of gene ENSG00000167397.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000394975.2	VKORC1-001	1012	163aa	ENSP00000378426.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10703	I3L1P9 Q9BQB6	NM_024006.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000319788.7	VKORC1-002	1077	156aa	ENSP00000326135.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9BQB6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000354895.4	VKORC1-003	901	92aa	ENSP00000346969.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10704	Q9BQB6	NM_206824.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000300851.6	VKORC1-004	876	149aa	ENSP00000300851.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W9H0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000498155.1	VKORC1-007	870	161aa	ENSP00000417662.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F2Z3Q2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000420057.2	VKORC1-008	746	92aa	ENSP00000437064.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000394971.3	VKORC1-006	664	160aa	ENSP00000378422.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MV79	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000472468.1	VKORC1-005	461	43aa	ENSP00000458994.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L1P9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 901 bps, Translation length: 92 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BQB6

CCDS

This transcript is a member of the Human CCDS set: CCDS10704

Version

ENST00000354895.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000108584 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000354895.4 VKORC1-003

Summary