Transcript: ENST00000300291.5 NUDT21-001

Description

nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Source:HGNC Symbol;Acc:13870]

Gene Synonyms

CFIM25, CPSF25, CPSF5

Location

About this transcript

This transcript has 7 exons, is annotated with 6 domains and features, is associated with 9373 variant alleles and maps to 584 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000300291.5	NUDT21-001	4436	227aa	ENSP00000300291.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10760	H3BND3 H3BV41 O43809	NM_007006.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000566340.1	NUDT21-003	581	149aa	ENSP00000454790.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BND3 H3BV41	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000568822.1	NUDT21-005	385	71aa	ENSP00000457942.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BV41	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000567110.1	NUDT21-004	607	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000563860.1	NUDT21-007	578	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000563362.1	NUDT21-006	449	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 4,436 bps, Translation length: 227 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43809

CCDS

This transcript is a member of the Human CCDS set: CCDS10760

Version

ENST00000300291.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000256980 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.