Transcript: ENST00000561878.1 TMEM170A-001

Description

transmembrane protein 170A [Source:HGNC Symbol;Acc:29577]

Gene Synonyms

FLJ37611, TMEM170

Location

Chromosome 16: 75,480,917-75,498,596 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 7 domains and features, is associated with 9786 variant alleles and maps to 260 oligo probes.

Gene

This transcript is a product of gene ENSG00000166822.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000357613.4	TMEM170A-002	4959	121aa	ENSP00000350230.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BRD7 Q8WVE7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000569540.1	TMEM170A-003	2331	106aa	ENSP00000455491.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KT46 H3BS26	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000561878.1	TMEM170A-001	1072	144aa	ENSP00000454404.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10917	H3BS26 Q8WVE7	NM_145254.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000567796.1	TMEM170A-006	734	99aa	ENSP00000456509.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BS26	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000569276.1	TMEM170A-008	609	113aa	ENSP00000455938.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BQT8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000566980.1	TMEM170A-005	547	76aa	ENSP00000456194.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BRD7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000568559.1	TMEM170A-004	4345	121aa	ENSP00000454552.1	Nonsense mediated decay		H3BRD7 Q8WVE7	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,072 bps, Translation length: 144 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8WVE7

CCDS

This transcript is a member of the Human CCDS set: CCDS10917

Version

ENST00000561878.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000269030 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000561878.1 TMEM170A-001

Summary