Transcript: ENST00000299709.3 SLC38A8-001

Description

solute carrier family 38, member 8 [Source:HGNC Symbol;Acc:32434]

Location

About this transcript

This transcript has 10 exons, is annotated with 15 domains and features, is associated with 28732 variant alleles and maps to 274 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000299709.3	SLC38A8-001	1308	435aa	ENSP00000299709.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32495	A6NNN8 H3BP02 H3BUP5	NM_001080442.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000568178.1	SLC38A8-002	861	262aa	ENSP00000457737.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BP02 H3BUP5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000569816.1	SLC38A8-003	578	46aa	ENSP00000455085.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BP02	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000568003.1	SLC38A8-004	501	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,308 bps, Translation length: 435 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A6NNN8

CCDS

This transcript is a member of the Human CCDS set: CCDS32495

Version

ENST00000299709.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000432623 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.