Transcript: ENST00000561796.1 BEAN1-004

Description

brain expressed, associated with NEDD4, 1 [Source:HGNC Symbol;Acc:24160]

Gene Synonyms

BEAN, SCA31

Location

Chromosome 16: 66,461,274-66,527,432 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 2 domains and features, is associated with 27837 variant alleles and maps to 144 oligo probes.

Gene

This transcript is a product of gene ENSG00000166546.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000564819.1	BEAN1-007	2929	72aa	ENSP00000456430.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BRW1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000299694.8	BEAN1-003	2160	150aa	ENSP00000299694.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58469	Q3B7T3	NM_001136106.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536005.2	BEAN1-002	1988	259aa	ENSP00000442793.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54015	Q3B7T3	NM_001178020.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000561796.1	BEAN1-004	1078	208aa	ENSP00000455212.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58470	Q3B7T3	NM_001197225.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000562146.1	BEAN1-009	644	82aa	ENSP00000462088.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000562849.2	BEAN1-001	2469	150aa	ENSP00000456822.1	Nonsense mediated decay	CCDS58469	Q3B7T3	-	-
ENST00000563075.1	BEAN1-008	720	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000566654.1	BEAN1-006	449	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000569272.1	BEAN1-010	963	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 1,078 bps, Translation length: 208 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q3B7T3

CCDS

This transcript is a member of the Human CCDS set: CCDS58470

Version

ENST00000561796.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000422912 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000561796.1 BEAN1-004

Summary