Transcript: ENST00000536789.1 A2ML1-008

Description

alpha-2-macroglobulin-like 1 [Source:HGNC Symbol;Acc:23336]

Gene Synonyms

CPAMD9, FLJ25179

Location

Chromosome 12: 8,997,550-8,998,720 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 3 domains and features, is associated with 762 variant alleles and maps to 48 oligo probes.

Gene

This transcript is a product of gene ENSG00000166535.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000299698.7	A2ML1-001	5274	1454aa	ENSP00000299698.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8596	A8K2U0 H0YGG5	NM_144670.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539547.1	A2ML1-004	3460	963aa	ENSP00000438292.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H2Z2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541459.1	A2ML1-003	3370	1004aa	ENSP00000443174.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YGG5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000545692.1	A2ML1-009	570	183aa	ENSP00000440057.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GXP1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000536789.1	A2ML1-008	462	81aa	ENSP00000440662.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GYG7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000537475.1	A2ML1-006	1136	182aa	ENSP00000445674.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000540049.1	A2ML1-010	592	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000537546.1	A2ML1-011	560	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000545850.1	A2ML1-007	464	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 462 bps, Translation length: 81 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000536789.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000395958 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000536789.1 A2ML1-008

Summary