Transcript: ENST00000486993.1 SGPL1-002

Description

sphingosine-1-phosphate lyase 1 [Source:HGNC Symbol;Acc:10817]

Gene Synonyms

KIAA1252, S1PL, SPL

Location

About this transcript

This transcript has 3 exons, is associated with 1929 variant alleles and maps to 102 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000373202.3	SGPL1-001	5745	568aa	ENSP00000362298.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31216	O95470	NM_003901.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000299297.4	SGPL1-004	658	202aa	ENSP00000299297.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BXL7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000409118.2	SGPL1-006	462	135aa	ENSP00000386549.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000486993.1	SGPL1-002	537	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 537 bps,

Version

ENST00000486993.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000048534 (version 1)