Transcript: ENST00000342420.5 TPTE-003

Description

transmembrane phosphatase with tensin homology [Source:HGNC Symbol;Acc:12023]

Gene Synonyms

CT44, PTEN2

Location

About this transcript

This transcript has 22 exons, is annotated with 19 domains and features, is associated with 74263 variant alleles and maps to 884 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000298232.7	TPTE-001	2674	533aa	ENSP00000298232.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33512	P56180	NM_199259.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000361285.4	TPTE-002	2150	551aa	ENSP00000355208.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13560	P56180	NM_199261.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000342420.5	TPTE-003	2036	513aa	ENSP00000344441.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33511	P56180	NM_199260.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000328758.5	TPTE-005	723	130aa	ENSP00000399471.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JUN1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000415664.2	TPTE-006	3336	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000447568.2	TPTE-004	1874	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 22, Coding exons: 19, Transcript length: 2,036 bps, Translation length: 513 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P56180

CCDS

This transcript is a member of the Human CCDS set: CCDS33511

Version

ENST00000342420.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000157414 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.