Transcript: ENST00000558590.1 AMN-003

Description

amnion associated transmembrane protein [Source:HGNC Symbol;Acc:14604]

Gene Synonyms

PRO1028, amnionless

Location

Chromosome 14: 103,394,982-103,399,933 forward strand.

About this transcript

This transcript has 9 exons, is associated with 3623 variant alleles and maps to 423 oligo probes.

Gene

This transcript is a product of gene ENSG00000166126.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000299155.5	AMN-001	1907	453aa	ENSP00000299155.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9977	B3KP64 Q9BXJ7	NM_030943.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000559789.1	AMN-007	393	131aa	ENSP00000452831.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000559525.1	AMN-006	320	107aa	ENSP00000453786.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000558590.1	AMN-003	2772	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000541086.1	AMN-002	2269	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000559442.1	AMN-005	470	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000559507.1	AMN-004	435	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 0, Transcript length: 2,772 bps,

Version

ENST00000558590.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000415706 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000558590.1 AMN-003

Summary