Transcript: ENST00000340124.4 GPT2-001

Description

glutamic pyruvate transaminase (alanine aminotransferase) 2 [Source:HGNC Symbol;Acc:18062]

Gene Synonyms

AAT2, ALT2

Location

About this transcript

This transcript has 12 exons, is annotated with 7 domains and features, is associated with 20763 variant alleles and maps to 501 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000440783.2	GPT2-002	4228	423aa	ENSP00000413804.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45478	B3KR40 Q8TD30	NM_001142466.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000340124.4	GPT2-001	3984	523aa	ENSP00000345282.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10725	B3KR40 Q8TD30	NM_133443.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000562132.1	GPT2-004	554	177aa	ENSP00000457475.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BU54	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000569193.1	GPT2-003	3205	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000562801.1	GPT2-006	2092	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 3,984 bps, Translation length: 523 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8TD30

CCDS

This transcript is a member of the Human CCDS set: CCDS10725

Version

ENST00000340124.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000255741 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.