Transcript: ENST00000479913.1 RET-004

Description

ret proto-oncogene [Source:HGNC Symbol;Acc:9967]

Gene Synonyms

CDHF12, CDHR16, HSCR1, MEN2A, MEN2B, MTC1, PTC, RET-ELE1, RET51

Location

About this transcript

This transcript has 2 exons, is associated with 1480 variant alleles and maps to 100 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000355710.3	RET-001	5659	1114aa	ENSP00000347942.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7200	P07949 Q8IZR8 Q8NFE8 Q9UE13 Q9UM90 Q9UQV8	NM_020975.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000340058.5	RET-002	4149	1072aa	ENSP00000344798.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53525	B4DGX8 P07949 Q8IZR8 Q8NFE8 Q9UE13 Q9UQV8	NM_020630.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000498820.1	RET-003	729	181aa	ENSP00000419080.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JYL6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000479913.1	RET-004	577	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 577 bps,

Version

ENST00000479913.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000358140 (version 1)