Transcript: ENST00000334464.5 PDZD8-001

Description

PDZ domain containing 8 [Source:HGNC Symbol;Acc:26974]

Gene Synonyms

FLJ34427, PDZK8, bA129M16.2

Location

About this transcript

This transcript has 5 exons, is annotated with 20 domains and features, is associated with 38756 variant alleles and maps to 499 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000334464.5	PDZD8-001	6484	1154aa	ENSP00000334642.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7600	Q8NEN9	NM_173791.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000482496.1	PDZD8-002	1400	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489302.1	PDZD8-003	740	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489491.1	PDZD8-004	289	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 6,484 bps, Translation length: 1,154 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NEN9

CCDS

This transcript is a member of the Human CCDS set: CCDS7600

Version

ENST00000334464.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000050565 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.