Transcript: ENST00000555804.1 OTX2-003

Description

orthodenticle homeobox 2 [Source:HGNC Symbol;Acc:8522]

Gene Synonyms

CPHD6, MCOPS5

Location

Chromosome 14: 57,268,833-57,277,197 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 10 domains and features, is associated with 4080 variant alleles and maps to 222 oligo probes.

Gene

This transcript is a product of gene ENSG00000165588.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000339475.5	OTX2-001	2199	297aa	ENSP00000343819.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9728	F1T0D1 G3V3P9 P32243	NM_021728.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555006.1	OTX2-002	1279	289aa	ENSP00000452336.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41960	F1T0D0 G3V3J3 P32243	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000408990.3	OTX2-007	1082	289aa	ENSP00000386185.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41960	F1T0D0 G3V3J3 P32243	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554845.1	OTX2-006	908	238aa	ENSP00000451357.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V3P9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000554788.1	OTX2-005	835	35aa	ENSP00000474486.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F1T0C9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555804.1	OTX2-003	797	163aa	ENSP00000451272.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V3J3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000554559.1	OTX2-004	715	35aa	ENSP00000450468.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F1T0C9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 6, Coding exons: 3, Transcript length: 797 bps, Translation length: 163 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000555804.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000411526 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000555804.1 OTX2-003

Summary