Transcript: ENST00000298119.4 LRFN5-001

Description

leucine rich repeat and fibronectin type III domain containing 5 [Source:HGNC Symbol;Acc:20360]

Gene Synonyms

C14orf146, FIGLER8, SALM5

Location

About this transcript

This transcript has 6 exons, is annotated with 31 domains and features, is associated with 138245 variant alleles and maps to 345 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000554171.1	LRFN5-003	4253	466aa	ENSP00000451067.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V364	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000298119.4	LRFN5-001	3723	719aa	ENSP00000298119.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9678	Q96NI6	NM_152447.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554120.1	LRFN5-006	2121	465aa	ENSP00000451897.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V4N1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555279.1	LRFN5-005	582	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000553926.1	LRFN5-004	204	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 3,723 bps, Translation length: 719 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96NI6

CCDS

This transcript is a member of the Human CCDS set: CCDS9678

Version

ENST00000298119.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000276786 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.