Transcript: ENST00000297598.4 PDP1-001

Description

pyruvate dehyrogenase phosphatase catalytic subunit 1 [Source:HGNC Symbol;Acc:9279]

Gene Synonyms

PDH, PDP, PDPC, PPM2C

Location

Chromosome 8: 94,929,083-94,938,290 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 11 domains and features, is associated with 4496 variant alleles and maps to 426 oligo probes.

Gene

This transcript is a product of gene ENSG00000164951.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000396200.3	PDP1-201	4358	562aa	ENSP00000379503.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55262	B3KPZ7 B4DYX8 E5RFL8 E5RHB9 E5RI96 E5RIE5 E5RIV4 Q6P1N1 Q9P0J1	NM_001161779.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000297598.4	PDP1-001	4272	537aa	ENSP00000297598.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6259	B3KPZ7 E5RFL8 E5RHB9 E5RI96 E5RIE5 E5RIV4 Q9P0J1	NM_018444.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520728.1	PDP1-002	2554	537aa	ENSP00000428317.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6259	B3KPZ7 E5RFL8 E5RHB9 E5RI96 E5RIE5 E5RIV4 Q9P0J1	NM_001161780.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000517764.1	PDP1-004	2140	537aa	ENSP00000430380.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6259	B3KPZ7 E5RFL8 E5RHB9 E5RI96 E5RIE5 E5RIV4 Q9P0J1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518827.1	PDP1-009	1284	232aa	ENSP00000430655.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFL8 E5RHB9 E5RI96 E5RIE5 E5RIV4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000518573.1	PDP1-008	596	128aa	ENSP00000428433.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFL8 E5RHB9 E5RIE5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000518107.1	PDP1-007	581	76aa	ENSP00000430366.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFL8 E5RHB9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000521144.1	PDP1-010	544	147aa	ENSP00000429492.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFL8 E5RHB9 E5RI96 E5RIE5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000520614.1	PDP1-006	341	72aa	ENSP00000430931.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RHB9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000523021.1	PDP1-005	510	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 4,272 bps, Translation length: 537 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9P0J1

CCDS

This transcript is a member of the Human CCDS set: CCDS6259

Version

ENST00000297598.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000378415 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000297598.4 PDP1-001

Summary