Transcript: ENST00000330295.5 CTHRC1-001

Description

collagen triple helix repeat containing 1 [Source:HGNC Symbol;Acc:18831]

Location

About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 4747 variant alleles and maps to 275 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000330295.5	CTHRC1-001	1271	243aa	ENSP00000330523.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6299	E5RK99 Q96CG8	NM_138455.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520337.1	CTHRC1-003	1198	229aa	ENSP00000430550.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59110	E5RK99 Q96CG8	NM_001256099.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415886.2	CTHRC1-004	571	147aa	ENSP00000416045.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EVQ5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520880.1	CTHRC1-002	560	113aa	ENSP00000430399.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RK99	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,271 bps, Translation length: 243 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96CG8

CCDS

This transcript is a member of the Human CCDS set: CCDS6299

Version

ENST00000330295.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000380792 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.