Transcript: ENST00000297350.4 TNFRSF11B-001

Description

tumor necrosis factor receptor superfamily, member 11b [Source:HGNC Symbol;Acc:11909]

Gene Synonyms

OCIF, OPG, TR1

Location

About this transcript

This transcript has 5 exons, is annotated with 31 domains and features, is associated with 12142 variant alleles and maps to 411 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000297350.4	TNFRSF11B-001	2402	401aa	ENSP00000297350.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6326	O00300	NM_002546.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000517352.1	TNFRSF11B-002	1144	145aa	ENSP00000427924.1	Nonsense mediated decay		E5RFV7	-	-
ENST00000521597.1	TNFRSF11B-003	849	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,402 bps, Translation length: 401 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O00300

CCDS

This transcript is a member of the Human CCDS set: CCDS6326

Version

ENST00000297350.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000381220 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.