Transcript: ENST00000356195.5 CDCA7L-006

Description

cell division cycle associated 7-like [Source:HGNC Symbol;Acc:30777]

Gene Synonyms

HR1, JPO2, R1, RAM2

Location

Chromosome 7: 21,940,518-21,985,496 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 6 domains and features, is associated with 24513 variant alleles and maps to 546 oligo probes.

Gene

This transcript is a product of gene ENSG00000164649.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000406877.3	CDCA7L-001	3066	454aa	ENSP00000383986.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5374	C9JFL7 Q96GN5	NM_018719.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000356195.5	CDCA7L-006	2915	420aa	ENSP00000348523.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47559	C9JFL7 Q96GN5	NM_001127370.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373934.4	CDCA7L-010	1830	408aa	ENSP00000363045.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47558	Q96GN5	NM_001127371.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000435717.1	CDCA7L-008	611	98aa	ENSP00000400673.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000447180.1	CDCA7L-007	569	113aa	ENSP00000411337.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J8L0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000457951.1	CDCA7L-009	568	156aa	ENSP00000406616.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9IZR6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000435031.1	CDCA7L-002	563	96aa	ENSP00000410014.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JFL7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000465490.1	CDCA7L-003	998	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488845.1	CDCA7L-004	1943	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000489669.1	CDCA7L-005	571	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 9, Transcript length: 2,915 bps, Translation length: 420 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96GN5

CCDS

This transcript is a member of the Human CCDS set: CCDS47559

Version

ENST00000356195.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000326585 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000356195.5 CDCA7L-006

Summary