Transcript: ENST00000347053.3 COG5-001

Description

component of oligomeric golgi complex 5 [Source:HGNC Symbol;Acc:14857]

Gene Synonyms

CDG2I, GOLTC1, GTC90

Location

Chromosome 7: 106,842,000-107,204,485 reverse strand.

About this transcript

This transcript has 21 exons, is annotated with 6 domains and features, is associated with 164556 variant alleles and maps to 796 oligo probes.

Gene

This transcript is a product of gene ENSG00000164597.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000393603.2	COG5-002	5418	823aa	ENSP00000377228.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55152	Q9UP83 U3KQU7	NM_001161520.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000347053.3	COG5-001	4532	839aa	ENSP00000334703.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5743	Q9UP83 U3KQU7	NM_181733.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000297135.3	COG5-003	4060	860aa	ENSP00000297135.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5742	B3KMW0 Q9UP83 U3KQU7	NM_006348.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000605888.1	COG5-010	576	179aa	ENSP00000476238.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		U3KQU7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000475638.2	COG5-004	592	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468350.1	COG5-008	581	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484237.1	COG5-006	574	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464542.1	COG5-009	897	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000462342.1	COG5-007	577	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000469503.1	COG5-005	238	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 4,532 bps, Translation length: 839 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UP83

CCDS

This transcript is a member of the Human CCDS set: CCDS5743

Version

ENST00000347053.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000060216 (version 4)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000347053.3 COG5-001

Summary