Transcript: ENST00000508001.1 PRIMPOL-011

Description

primase and polymerase (DNA-directed) [Source:HGNC Symbol;Acc:26575]

Gene Synonyms

CCDC111, FLJ33167, MYP22

Location

Chromosome 4: 185,599,431-185,615,746 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 4 domains and features, is associated with 7218 variant alleles and maps to 250 oligo probes.

Gene

This transcript is a product of gene ENSG00000164306.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000314970.6	PRIMPOL-001	2289	560aa	ENSP00000313816.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3837	D6R971 D6RAH5 Q96LW4	NM_152683.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000512834.1	PRIMPOL-002	2174	559aa	ENSP00000425316.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R971 D6RDM1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000503752.1	PRIMPOL-005	2168	560aa	ENSP00000420860.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3837	D6R971 D6RAH5 Q96LW4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000515774.1	PRIMPOL-003	2007	431aa	ENSP00000421913.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RAH5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000508001.1	PRIMPOL-011	518	172aa	ENSP00000424639.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y9N8	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000509002.1	PRIMPOL-004	1631	93aa	ENSP00000423353.1	Nonsense mediated decay		D6R971	-	-
ENST00000506278.1	PRIMPOL-006	1138	112aa	ENSP00000423409.1	Nonsense mediated decay		D6R908	-	-
ENST00000515152.1	PRIMPOL-007	784	112aa	ENSP00000422199.1	Nonsense mediated decay		D6R908	-	-
ENST00000510864.1	PRIMPOL-010	509	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000509538.1	PRIMPOL-008	804	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000512658.1	PRIMPOL-009	498	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 518 bps, Translation length: 172 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENST00000508001.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000360837 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000508001.1 PRIMPOL-011

Summary