Transcript: ENST00000509193.1 SERINC5-004

Description

serine incorporator 5 [Source:HGNC Symbol;Acc:18825]

Gene Synonyms

C5orf12, TPO1

Location

Chromosome 5: 79,407,474-79,551,838 reverse strand.

About this transcript

This transcript has 14 exons, is annotated with 15 domains and features, is associated with 66977 variant alleles and maps to 363 oligo probes.

Gene

This transcript is a product of gene ENSG00000164300.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000507668.2	SERINC5-201	1928	423aa	ENSP00000426237.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54873	Q86VE9	NM_178276.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000512972.2	SERINC5-005	1627	417aa	ENSP00000421665.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q86VE9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000512721.1	SERINC5-001	1583	461aa	ENSP00000420863.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54874	Q86VE9	NM_001174072.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000509193.1	SERINC5-004	1573	456aa	ENSP00000426134.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RHG7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000513907.1	SERINC5-002	547	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000502747.1	SERINC5-003	2767	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 13, Transcript length: 1,573 bps, Translation length: 456 residues

Version

ENST00000509193.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000369916 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000509193.1 SERINC5-004

Summary