Transcript: ENST00000424906.1 ATRIP-003

Description

ATR interacting protein [Source:HGNC Symbol;Acc:33499]

Gene Synonyms

AGS1, FLJ12343, MGC20625, MGC21482, MGC26740

Location

Chromosome 3: 48,488,141-48,507,054 forward strand.

About this transcript

This transcript has 14 exons, is associated with 8306 variant alleles and maps to 880 oligo probes.

Gene

This transcript is a product of gene ENSG00000164053.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000412052.1	ATRIP-005	2721	698aa	ENSP00000400930.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59449	C9IZM8 Q8WXE1	NM_001271023.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000320211.3	ATRIP-001	2590	791aa	ENSP00000323099.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2768	C9IZM8 Q8WXE1	NM_130384.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000346691.4	ATRIP-002	2509	764aa	ENSP00000302338.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2767	C9IZM8 Q8WXE1	NM_032166.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357105.6	ATRIP-201	2376	664aa	ENSP00000349620.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59450	Q8WXE1	NM_001271022.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000421175.1	ATRIP-007	711	196aa	ENSP00000406664.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9IZM8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000424906.1	ATRIP-003	2376	46aa	ENSP00000401761.1	Nonsense mediated decay		F8WEI5	-	-
ENST00000454733.1	ATRIP-008	793	131aa	ENSP00000402340.1	Nonsense mediated decay		F8WE08	-	-
ENST00000491468.1	ATRIP-009	545	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 2, Transcript length: 2,376 bps, Translation length: 46 residues

Version

ENST00000424906.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000344692 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000424906.1 ATRIP-003

Summary