Transcript: ENST00000296271.3 RHO-001

Description

rhodopsin [Source:HGNC Symbol;Acc:10012]

Gene Synonyms

CSNBAD1, OPN2, RP4

Location

About this transcript

This transcript has 5 exons, is annotated with 34 domains and features, is associated with 3834 variant alleles and maps to 488 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000296271.3	RHO-001	2592	348aa	ENSP00000296271.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3063	P08100	NM_000539.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,592 bps, Translation length: 348 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P08100

CCDS

This transcript is a member of the Human CCDS set: CCDS3063

Version

ENST00000296271.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000356101 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.