Transcript: ENST00000397170.3 CRELD1-002

Description

cysteine-rich with EGF-like domains 1 [Source:HGNC Symbol;Acc:14630]

Gene Synonyms

AVSD2, CIRRIN

Location

Chromosome 3: 9,975,506-9,986,678 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 31 domains and features, is associated with 5988 variant alleles and maps to 472 oligo probes.

Gene

This transcript is a product of gene ENSG00000163703.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000383811.3	CRELD1-001	2696	420aa	ENSP00000373322.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2593	Q96HD1	NM_015513.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000326434.5	CRELD1-004	1994	422aa	ENSP00000321856.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33693	Q96HD1	NM_001031717.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000452070.1	CRELD1-003	1778	420aa	ENSP00000393643.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2593	Q96HD1	NM_001077415.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397170.3	CRELD1-002	1728	420aa	ENSP00000380355.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2593	Q96HD1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000435417.1	CRELD1-013	966	100aa	ENSP00000406556.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000414117.1	CRELD1-008	723	101aa	ENSP00000411021.1	Nonsense mediated decay		F8WBY3	-	-
ENST00000489674.1	CRELD1-010	437	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465716.1	CRELD1-009	889	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000482691.1	CRELD1-012	690	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467713.1	CRELD1-011	540	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000491527.1	CRELD1-007	360	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 1,728 bps, Translation length: 420 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96HD1

CCDS

This transcript is a member of the Human CCDS set: CCDS2593

Version

ENST00000397170.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000339237 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000397170.3 CRELD1-002

Summary