Transcript: ENST00000328863.4 CLRN1-201

Description

clarin 1 [Source:HGNC Symbol;Acc:12605]

Gene Synonyms

RP61, USH3, USH3A

Location

Chromosome 3: 150,645,723-150,690,495 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 8 domains and features, is associated with 19544 variant alleles and maps to 276 oligo probes.

Gene

This transcript is a product of gene ENSG00000163646.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000327047.1	CLRN1-001	2359	232aa	ENSP00000322280.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3153	C9JWF3 P58418	NM_174878.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000295911.2	CLRN1-003	1444	120aa	ENSP00000295911.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35492	C9JWF3 P58418	NM_052995.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000328863.4	CLRN1-201	738	245aa	ENSP00000329158.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56285	P58418	NM_001195794.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000468836.1	CLRN1-005	722	115aa	ENSP00000419892.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JWF3 C9JYI2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000485607.1	CLRN1-002	704	39aa	ENSP00000419244.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JWF3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000472224.1	CLRN1-004	606	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 738 bps, Translation length: 245 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P58418

CCDS

This transcript is a member of the Human CCDS set: CCDS56285

Version

ENST00000328863.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000328863.4 CLRN1-201

Summary