Transcript: ENST00000449739.2 COX18-003

Description

COX18 cytochrome C oxidase assembly factor [Source:HGNC Symbol;Acc:26801]

Gene Synonyms

COX18HS, FLJ38991, OXA1L2

Location

About this transcript

This transcript has 5 exons, is annotated with 2 domains and features, is associated with 6377 variant alleles and maps to 358 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000295890.4	COX18-001	3128	333aa	ENSP00000295890.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3554	Q8N8Q8	NM_173827.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507544.2	COX18-006	1086	334aa	ENSP00000425261.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZL88	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000449739.2	COX18-003	3027	129aa	ENSP00000394583.2	Nonsense mediated decay		Q8N8Q8	-	-
ENST00000510031.1	COX18-004	1083	127aa	ENSP00000424978.1	Nonsense mediated decay		Q8N8Q8	-	-
ENST00000421792.2	COX18-002	548	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 3,027 bps, Translation length: 129 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N8Q8

Version

ENST00000449739.2

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000362418 (version 1)