Transcript: ENST00000473483.1 IGFN1-002

Description

immunoglobulin-like and fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:24607]

Gene Synonyms

DKFZp434B1231, EEF1A2BP1, KYIP1

Location

Chromosome 1: 201,182,224-201,198,080 forward strand.

About this transcript

This transcript has 12 exons, is associated with 8510 variant alleles and maps to 428 oligo probes.

Gene

This transcript is a product of gene ENSG00000163395.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000335211.4	IGFN1-202	11810	3708aa	ENSP00000334714.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53455	Q86VF2	NM_001164586.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000295591.8	IGFN1-201	11614	608aa	ENSP00000295591.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7WP51	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000412892.1	IGFN1-001	3932	1126aa	ENSP00000387975.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000451870.2	IGFN1-203	1843	570aa	ENSP00000398386.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q86VF2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000437879.2	IGFN1-004	4085	570aa	ENSP00000399041.2	Nonsense mediated decay		Q86VF2	-	-
ENST00000473483.1	IGFN1-002	3588	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000444705.2	IGFN1-003	666	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 0, Transcript length: 3,588 bps,

Version

ENST00000473483.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000086893 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000473483.1 IGFN1-002

Summary