Transcript: ENST00000295522.3 CLDN1-001

Description

claudin 1 [Source:HGNC Symbol;Acc:2032]

Gene Synonyms

CLD1, ILVASC, SEMP1

Location

About this transcript

This transcript has 4 exons, is annotated with 18 domains and features, is associated with 6883 variant alleles and maps to 416 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000295522.3	CLDN1-001	3481	211aa	ENSP00000295522.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3295	A5JSJ9 B4DLC3 O95832	NM_021101.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000490800.1	CLDN1-004	432	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 3,481 bps, Translation length: 211 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O95832

CCDS

This transcript is a member of the Human CCDS set: CCDS3295

Version

ENST00000295522.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000343516 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.