Transcript: ENST00000406895.3 C2orf44-002

Description

chromosome 2 open reading frame 44 [Source:HGNC Symbol;Acc:26157]

Gene Synonyms

FLJ21945

Location

About this transcript

This transcript has 3 exons, is annotated with 8 domains and features, is associated with 7721 variant alleles and maps to 297 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000295148.4	C2orf44-001	3817	721aa	ENSP00000295148.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1705	C9JYC1 Q9H6R7	NM_025203.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000406895.3	C2orf44-002	3700	622aa	ENSP00000385816.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46229	C9JYC1 Q9H6R7	NM_001142319.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000443232.1	C2orf44-003	562	174aa	ENSP00000413426.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JYC1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 3,700 bps, Translation length: 622 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H6R7

CCDS

This transcript is a member of the Human CCDS set: CCDS46229

Version

ENST00000406895.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000324347 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.