Transcript: ENST00000367618.3 AXDND1-004

Description

axonemal dynein light chain domain containing 1 [Source:HGNC Symbol;Acc:26564]

Gene Synonyms

C1orf125, FLJ32940, RP11-215I23.2

Location

Chromosome 1: 179,334,855-179,523,870 forward strand.

About this transcript

This transcript has 26 exons, is annotated with 14 domains and features, is associated with 82355 variant alleles and maps to 757 oligo probes.

Gene

This transcript is a product of gene ENSG00000162779.16 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000367618.3	AXDND1-004	3642	1012aa	ENSP00000356590.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30948	D6R9B7 D6RB87 D6RCN1 D6RDY4 D6REE1 Q5T1B0	NM_144696.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434088.1	AXDND1-001	2835	872aa	ENSP00000391716.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AM31	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000457238.2	AXDND1-201	2714	655aa	ENSP00000416712.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9B7 D6RB87 D6RCN1 D6RDY4 D6REE1 F5GWM2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000509175.1	AXDND1-008	765	151aa	ENSP00000425019.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RCN1 D6RDY4 D6REE1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000508229.1	AXDND1-010	586	78aa	ENSP00000422992.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9B7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000511889.1	AXDND1-011	553	123aa	ENSP00000425198.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RCN1 D6RDY4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000507383.1	AXDND1-009	534	83aa	ENSP00000427142.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RCN1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000508285.1	AXDND1-013	510	125aa	ENSP00000424337.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9B7 D6RB87 D6RCN1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000511157.1	AXDND1-007	3375	529aa	ENSP00000424373.1	Nonsense mediated decay		A6H900 D6R9B7 D6RB87 D6RCN1 D6RDY4 D6REE1	-	-
ENST00000461179.2	AXDND1-002	1970	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489080.1	AXDND1-006	1857	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484883.1	AXDND1-003	1134	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484455.1	AXDND1-005	672	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000510593.1	AXDND1-012	576	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 26, Coding exons: 25, Transcript length: 3,642 bps, Translation length: 1,012 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5T1B0

CCDS

This transcript is a member of the Human CCDS set: CCDS30948

Version

ENST00000367618.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000085312 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000367618.3 AXDND1-004

Summary