Transcript: ENST00000294702.5 GFI1-002

Description

growth factor independent 1 transcription repressor [Source:HGNC Symbol;Acc:4237]

Gene Synonyms

GFI-1, GFI1A, SCN2, ZNF163

Location

About this transcript

This transcript has 7 exons, is annotated with 37 domains and features, is associated with 6111 variant alleles and maps to 420 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000370332.1	GFI1-001	2855	422aa	ENSP00000359357.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30773	D3DT36 Q99684	NM_001127215.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000294702.5	GFI1-002	2784	422aa	ENSP00000294702.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30773	D3DT36 Q99684	NM_005263.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427103.1	GFI1-201	2693	422aa	ENSP00000399719.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30773	D3DT36 Q99684	NM_001127216.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000483490.1	GFI1-003	508	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 2,784 bps, Translation length: 422 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q99684

CCDS

This transcript is a member of the Human CCDS set: CCDS30773

Version

ENST00000294702.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000030055 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.