Transcript: ENST00000377223.1 LZIC-001

Description

leucine zipper and CTNNBIP1 domain containing [Source:HGNC Symbol;Acc:17497]

Gene Synonyms

MGC15436

Location

Chromosome 1: 9,988,997-10,003,387 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 7 domains and features, is associated with 6625 variant alleles and maps to 468 oligo probes.

Gene

This transcript is a product of gene ENSG00000162441.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000377223.1	LZIC-001	2281	190aa	ENSP00000366430.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS107	Q8WZA0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000400903.2	LZIC-201	1405	190aa	ENSP00000383695.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS107	Q8WZA0	NM_032368.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541052.1	LZIC-202	961	211aa	ENSP00000437432.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E2N0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377213.1	LZIC-005	945	190aa	ENSP00000366418.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS107	Q8WZA0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000488540.1	LZIC-004	650	169aa	ENSP00000468610.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ES95	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000471853.1	LZIC-002	487	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 6, Transcript length: 2,281 bps, Translation length: 190 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8WZA0

CCDS

This transcript is a member of the Human CCDS set: CCDS107

Version

ENST00000377223.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000005037 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000377223.1 LZIC-001

Summary