Transcript: ENST00000377705.5 NOL9-001

Description

nucleolar protein 9 [Source:HGNC Symbol;Acc:26265]

Gene Synonyms

FLJ23323, Grc3, NET6

Location

About this transcript

This transcript has 12 exons, is annotated with 11 domains and features, is associated with 16518 variant alleles and maps to 633 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000377705.5	NOL9-001	6649	702aa	ENSP00000366934.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS80	Q5SY16	NM_024654.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000464383.1	NOL9-004	835	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000464665.1	NOL9-002	731	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000462798.1	NOL9-005	638	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000460777.1	NOL9-003	536	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 6,649 bps, Translation length: 702 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5SY16

CCDS

This transcript is a member of the Human CCDS set: CCDS80

Version

ENST00000377705.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000002625 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.