Transcript: ENST00000427314.2 RACGAP1-004

Description

Rac GTPase activating protein 1 [Source:HGNC Symbol;Acc:9804]

Gene Synonyms

CYK4, HsCYK-4, ID-GAP, KIAA1478, MGCRACGAP, MgcRacGAP

Location

Chromosome 12: 50,382,945-50,419,221 reverse strand.

About this transcript

This transcript has 19 exons, is annotated with 15 domains and features, is associated with 15215 variant alleles and maps to 584 oligo probes.

Gene

This transcript is a product of gene ENSG00000161800.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000434422.1	RACGAP1-201	3307	632aa	ENSP00000413241.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8795	F8VQZ5 F8VRD2 F8VRL2 F8VS54 F8VUW9 F8VV37 F8VV39 F8VV47 F8VWX0 F8VWY4 F8VYH6 F8VZ66 F8W0L1 Q9H0H5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427314.2	RACGAP1-004	3229	632aa	ENSP00000404190.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8795	F8VQZ5 F8VRD2 F8VRL2 F8VS54 F8VUW9 F8VV37 F8VV39 F8VV47 F8VWX0 F8VWY4 F8VYH6 F8VZ66 F8W0L1 Q9H0H5	NM_013277.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000454520.2	RACGAP1-005	3080	632aa	ENSP00000404808.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8795	F8VQZ5 F8VRD2 F8VRL2 F8VS54 F8VUW9 F8VV37 F8VV39 F8VV47 F8VWX0 F8VWY4 F8VYH6 F8VZ66 F8W0L1 Q9H0H5	NM_001126104.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000312377.5	RACGAP1-001	3073	632aa	ENSP00000309871.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8795	F8VQZ5 F8VRD2 F8VRL2 F8VS54 F8VUW9 F8VV37 F8VV39 F8VV47 F8VWX0 F8VWY4 F8VYH6 F8VZ66 F8W0L1 Q9H0H5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000551016.1	RACGAP1-002	2193	632aa	ENSP00000449374.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8795	F8VQZ5 F8VRD2 F8VRL2 F8VS54 F8VUW9 F8VV37 F8VV39 F8VV47 F8VWX0 F8VWY4 F8VYH6 F8VZ66 F8W0L1 Q9H0H5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000547905.1	RACGAP1-003	2190	632aa	ENSP00000449370.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8795	F8VQZ5 F8VRD2 F8VRL2 F8VS54 F8VUW9 F8VV37 F8VV39 F8VV47 F8VWX0 F8VWY4 F8VYH6 F8VZ66 F8W0L1 Q9H0H5	NM_001126103.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000552310.1	RACGAP1-024	932	293aa	ENSP00000448697.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VQZ5 F8VRD2 F8VS54 F8VUW9 F8VV37 F8VV39 F8VV47 F8VWX0 F8VWY4 F8VYH6 F8VZ66 F8W0L1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000549342.1	RACGAP1-018	841	280aa	ENSP00000449565.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YIK5	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000546595.1	RACGAP1-011	634	152aa	ENSP00000449963.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VQZ5 F8VV37 F8VYH6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000548644.1	RACGAP1-009	624	177aa	ENSP00000449620.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VS54 F8VUW9 F8VV39 F8VV47 F8VVE5 F8VWX0 F8VYH6 F8VZ66 F8W0L1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000548824.1	RACGAP1-026	586	174aa	ENSP00000449170.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VS54 F8VUW9 F8VV39 F8VV47 F8VWX0 F8VWY4 F8VYH6 F8VZ66 F8W0L1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000551145.1	RACGAP1-012	584	124aa	ENSP00000450064.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VQZ5 F8VYH6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000546764.1	RACGAP1-008	581	139aa	ENSP00000447177.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VS54 F8VUW9 F8VV39 F8VWX0 F8W0L1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000546723.1	RACGAP1-030	574	155aa	ENSP00000449669.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VS54 F8VUW9 F8VV39 F8VV47 F8VWX0 F8VYH6 F8VZ66 F8W0L1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000550149.1	RACGAP1-021	570	155aa	ENSP00000446642.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VQF5 F8W1E5 F8W1T4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000549777.1	RACGAP1-010	570	129aa	ENSP00000448707.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VS54 F8VUW9 F8VV39	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000546786.1	RACGAP1-019	568	136aa	ENSP00000447429.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VQF5 F8W1T4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000548247.1	RACGAP1-014	564	67aa	ENSP00000450074.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VQF5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000552921.1	RACGAP1-028	563	150aa	ENSP00000447393.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VS54 F8VUW9 F8VV39 F8VWX0 F8VYH6 F8VZ66 F8W0L1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000548320.1	RACGAP1-013	554	34aa	ENSP00000448507.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VRL2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000550651.1	RACGAP1-007	551	111aa	ENSP00000449959.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VUW9 F8VV39	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000551876.1	RACGAP1-006	539	130aa	ENSP00000449186.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VS54 F8VUW9 F8VV39 F8VWX0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000552004.1	RACGAP1-023	530	107aa	ENSP00000448136.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VUW9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000548961.1	RACGAP1-017	387	117aa	ENSP00000446889.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VZ41	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000552157.1	RACGAP1-020	386	83aa	ENSP00000448968.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VYH6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000548598.1	RACGAP1-031	582	49aa	ENSP00000449574.1	Nonsense mediated decay		F8VVY0	-	-
ENST00000551260.1	RACGAP1-029	555	56aa	ENSP00000448860.1	Nonsense mediated decay		F8VXH1	-	-
ENST00000547061.1	RACGAP1-015	581	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000548158.1	RACGAP1-016	596	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 19, Coding exons: 16, Transcript length: 3,229 bps, Translation length: 632 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H0H5

CCDS

This transcript is a member of the Human CCDS set: CCDS8795

Version

ENST00000427314.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000405997 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000427314.2 RACGAP1-004

Summary